Improved yield and health benefits of watercress grown in an indoor vertical farm
Y Qian, LE Hibbert, S Milner, E Katz, DJ Kliebenstein, G Taylor
Scientia Horticulturae 300, 111068
|
2022 |
Integrated omics reveal novel functions and underlying mechanisms of the receptor kinase FERONIA in Arabidopsis thaliana
P Wang, NM Clark, TM Nolan, G Song, PM Bartz, CY Liao, ...
The Plant Cell
|
2022 |
A keystone gene underlies the persistence of an experimental food web
MA Barbour, DJ Kliebenstein, J Bascompte
Science 376 (6588), 70-73
|
2022 |
The ease and complexity of identifying and using specialized metabolites for crop engineering
AJ Muhich, A Agosto-Ramos, DJ Kliebenstein
Emerging Topics in Life Sciences 6 (2), 153-162
|
2022 |
Mutation bias reflects natural selection in Arabidopsis thaliana
J Monroe, T Srikant, P Carbonell-Bejerano, C Becker, M Lensink, ...
Nature 602 (7895), 101-105
|
2022 |
Aphid Species and Feeding Location on Canola Influences the Impact of Glucosinolates on a Native Lady Beetle Predator
X Cibils-Stewart, DJ Kliebenstein, B Li, K Giles, BP McCornack, J Nechols
Environmental Entomology 51 (1), 52-62
|
2022 |
Differential genetic variation underlying Ammonium and Nitrate responses in Arabidopsis thaliana
E Katz, A Knapp, M Lensink, J Stefani, JJ Li, E Shane, K Tuermer-Lee, ...
bioRxiv
|
2022 |
A genome‐scale TF–DNA interaction network of transcriptional regulation of Arabidopsis primary and specialized metabolism
M Tang, B Li, X Zhou, T Bolt, JJ Li, N Cruz, A Gaudinier, R Ngo, ...
Molecular systems biology 17 (11), e10625
|
2021 |
A reevaluation of the role of the ASIL trihelix transcription factors as repressors of the seed maturation program
KA Ruiz, JM Pelletier, Y Wang, MJ Feng, JS Behr, TQ Ðào, B Li, ...
Plant direct 5 (10), e345
|
2021 |
Quantitative interactions: the disease outcome of Botrytis cinerea across the plant kingdom
C Caseys, G Shi, N Soltis, R Gwinner, J Corwin, S Atwell, DJ Kliebenstein
G3 11 (8), jkab175
|
2021 |
Appendix A: Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe
E Katz, SR Abrahams, C Bagaza, S Holden, CJ Pires, R Angelovici, ...
THE POWER OF SYNTENY: DEEP EVOLUTIONARY INSIGHTS FROM COMPARATIVE GENOMICS, 91
|
2021 |
Innovation, conservation, and repurposing of gene function in root cell type development
K Kajala, M Gouran, L Shaar-Moshe, GA Mason, J Rodriguez-Medina, ...
Cell 184 (12), 3333-3348. e19
|
2021 |
Genome size evolution is associated with climate seasonality and glucosinolates, but not life history, soil nutrients or range size, across a clade of mustards
NI Cacho, PJ McIntyre, DJ Kliebenstein, SY Strauss
Annals of botany 127 (7), 887-902
|
2021 |
Genetic variation, environment and demography intersect to shape Arabidopsis defense metabolite variation across Europe
E Katz, JJ Li, B Jaegle, H Ashkenazy, SR Abrahams, C Bagaza, S Holden, ...
Elife 10, e67784
|
2021 |
Fine mapping identifies NAD‐ME1 as a candidate underlying a major locus controlling temporal variation in primary and specialized metabolism in Arabidopsis
M Francisco, DJ Kliebenstein, VM Rodríguez, P Soengas, R Abilleira, ...
The Plant Journal 106 (2), 454-467
|
2021 |
The Arabidopsis thaliana nucleotide sugar transporter GONST2 is a functional homolog of GONST1
B Jing, T Ishikawa, N Soltis, N Inada, Y Liang, G Murawska, L Fang, ...
Plant direct 5 (3), e00309
|
2021 |
Red-light is an environmental effector for mutualism between begomovirus and its vector whitefly
P Zhao, X Zhang, Y Gong, D Wang, D Xu, N Wang, Y Sun, L Gao, SS Liu, ...
PLoS pathogens 17 (1), e1008770
|
2021 |
Plant Responses Underlying Timely Specialized Metabolites Induction of Brassica Crops.
M Doghri, VM Rodríguez, DJ Kliebenstein, M Francisco
Frontiers in Plant Science 12, 807710-807710
|
2021 |
Modeling quantitative interactions: the disease outcome of generalist fungal pathogen across the plant kingdom
C Caseys, G Shi, N Soltis, R Gwinner, J Corwin, S Atwell, D Kliebenstein
Authorea Preprints
|
2020 |
flasher, a novel mutation in a glucosinolate modifying enzyme, conditions changes in plant architecture and hormone homeostasis
AN Garrido, E Supijono, P Boshara, SJ Douglas, PE Stronghill, B Li, ...
The Plant Journal 103 (6), 1989-2006
|
2020 |
Plant secondary metabolites as defenses, regulators, and primary metabolites: the blurred functional trichotomy
M Erb, DJ Kliebenstein
Plant physiology 184 (1), 39-52
|
2020 |
Diverse allyl glucosinolate catabolites independently influence root growth and development
E Katz, R Bagchi, V Jeschke, ARM Rasmussen, A Hopper, M Burow, ...
Plant Physiology 183 (3), 1376-1390
|
2020 |
mGWAS uncovers Gln-Glucosinolate seed-specific interaction and its role in metabolic homeostasis
ML Slaten, A Yobi, C Bagaza, YO Chan, V Shrestha, S Holden, E Katz, ...
Plant physiology 183 (2), 483-500
|
2020 |
FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes.
P Fernández-Calvo, S Iñigo, G Glauser, M Tang, B Li, R De Clercq, ...
The New Phytologist 227 (4), 1124-1137
|
2020 |
Pathogen Genetic Control of Transcriptome Variation in the Arabidopsis thaliana – Botrytis cinerea Pathosystem
NE Soltis, C Caseys, W Zhang, JA Corwin, S Atwell, DJ Kliebenstein
Genetics 215 (1), 253-266
|
2020 |
Using networks to identify and interpret natural variation
DJ Kliebenstein
Current opinion in plant biology 54, 122-126
|
2020 |
Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense
B Li, M Tang, C Caseys, A Nelson, M Zhou, X Zhou, SM Brady, ...
Genetics 214 (2), 529-541
|
2020 |
mGWAS Uncovers Gln-Glucosinolate Seed-Speciic Interaction and its Role in Metabolic Homeostasis
E Katz, C Kanstrup, AE Lipka, DJ Kliebenstein, HH Nour-Eldin, ...
|
2020 |
Innovation, conservation and repurposing of gene function in plant root cell type development
K Kajala, L Shaar-Moshe, GA Mason, M Gouran, J Rodriguez-Medina, ...
BioRxiv
|
2020 |
Genetic diversity increases food-web persistence in the face of climate warming
MA Barbour, DJ Kliebenstein, J Bascompte
bioRxiv
|
2020 |
Quantitative interactions drive Botrytis cinerea disease outcome across the plant kingdom
C Caseys, G Shi, N Soltis, R Gwinner, J Corwin, S Atwell, D Kliebenstein
BioRxiv, 507491
|
2020 |
Identification and stacking of crucial traits required for the domestication of pennycress
R Chopra, EB Johnson, R Emenecker, EB Cahoon, J Lyons, ...
Nature Food 1 (1), 84-91
|
2020 |
PMR 5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
D Chiniquy, W Underwood, J Corwin, A Ryan, H Szemenyei, CC Lim, ...
The Plant Journal 100 (5), 1022-1035
|
2019 |
Auxin-sensitive Aux/IAA proteins mediate drought tolerance in Arabidopsis by regulating glucosinolate levels
M Salehin, B Li, M Tang, E Katz, L Song, JR Ecker, DJ Kliebenstein, ...
Nature Communications 10 (1), 1-9
|
2019 |
Plant networks as traits and hypotheses: moving beyond description
A Marshall-Colón, DJ Kliebenstein
Trends in plant science 24 (9), 840-852
|
2019 |
Viruses mobilize plant immunity to deter nonvector insect herbivores
P Zhao, X Yao, C Cai, R Li, J Du, Y Sun, M Wang, Z Zou, Q Wang, ...
Science advances 5 (8), eaav9801
|
2019 |
Diversity in plant defense genes increases food-web persistence
MA Barbour, DJ Kliebenstein, J Bascompte
2019 ESA Annual Meeting (August 11--16)
|
2019 |
Questionomics: Using Big Data to Ask and Answer Big Questions
DJ Kliebenstein
The Plant Cell 31 (7), 1404-1405
|
2019 |
Plant–necrotroph co-transcriptome networks illuminate a metabolic battlefield
W Zhang, JA Corwin, DH Copeland, J Feusier, R Eshbaugh, DE Cook, ...
elife 8, e44279
|
2019 |
The effect of rhizosphere microbes outweighs host plant genetics in reducing insect herbivory
CJ Hubbard, B Li, R McMinn, MT Brock, L Maignien, BE Ewers, ...
Molecular ecology 28 (7), 1801-1811
|
2019 |
Interactions of Tomato and Botrytis cinerea Genetic Diversity: Parsing the Contributions of Host Differentiation, Domestication, and Pathogen Variation
NE Soltis, S Atwell, G Shi, R Fordyce, R Gwinner, D Gao, A Shafi, ...
The Plant Cell 31 (2), 502-519
|
2019 |
Progress toward the identification and stacking of crucial domestication traits in pennycress
R Chopra, EB Johnson, R Emenecker, EB Cahoon, J Lyons, ...
bioRxiv, 609990
|
2019 |
Regulation of root angle and gravitropism
TW Toal, M Ron, D Gibson, K Kajala, B Splitt, LS Johnson, ND Miller, ...
G3: Genes, Genomes, Genetics 8 (12), 3841-3855
|
2018 |
Transcriptional regulation of nitrogen-associated metabolism and growth
A Gaudinier, J Rodriguez-Medina, L Zhang, A Olson, C Liseron-Monfils, ...
Nature 563 (7730), 259-264
|
2018 |
Digital imaging combined with genome-wide association mapping links loci to plant-pathogen interaction traits
RF Fordyce, NE Soltis, C Caseys, R Gwinner, JA Corwin, S Atwell, ...
Plant Physiology 178 (3), 1406-1422
|
2018 |
Plant nutrient acquisition entices herbivore
DJ Kliebenstein
Science 361 (6403), 642-643
|
2018 |
Fine mapping and candidate gene analysis for a major locus controlling circadian clock and secondary metabolism in Arabidopsis
M Francisco Candeira, VM Rodríguez Graña, ME Cartea González, ...
|
2018 |
The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis
R Samira, B Li, D Kliebenstein, C Li, E Davis, JW Gillikin, TA Long
Plant Molecular Biology 97 (4), 297-309
|
2018 |
Brassica oleracea: the dog of the plant world
ME Mabry, E Gallagher, MA Gore, JA Labate, SD Turner, IR Baxter, ...
Meeting Abstract 1
|
2018 |
Comparison of the relative potential for epigenetic and genetic variation to contribute to trait stability
EST Aller, LM Jagd, DJ Kliebenstein, M Burow
G3: Genes, Genomes, Genetics 8 (5), 1733-1746
|
2018 |
Quantitative genetics and genomics of plant resistance to insects
DJ Kliebenstein
Annual Plant Reviews online, 235-262
|
2018 |
GONST2 transports GDP-Mannose for sphingolipid glycosylation in the Golgi apparatus of Arabidopsis
B Jing, T Ishikawa, N Soltis, N Inada, Y Liang, G Murawska, ...
BioRxiv, 346775
|
2018 |
Combining Digital Imaging and Genome Wide Association Mapping to Dissect Uncharacterized Traits in Plant/Pathogen Interactions
RF Fordyce, NE Soltis, C Caseys, R Gwinner, JA Corwin, S Atwell, ...
bioRxiv, 296939
|
2018 |
Crop domestication and pathogen virulence: interactions of tomato and Botrytis genetic diversity
NE Soltis, S Atwell, G Shi, R Fordyce, R Gwinner, D Gao, A Shafi, ...
bioRxiv, 255992
|
2018 |
A generalist pathogen view of plant evolution
C Caseys, G Shi, N Soltis, R Gwinner, J Corwin, S Atwell, D Kliebenstein
bioRxiv, 507491
|
2018 |
Resequencing and association mapping of the generalist pathogen Botrytis cinerea
S Atwell, JA Corwin, N Soltis, W Zhang, D Copeland, J Feusier, ...
BioRxiv, 489799
|
2018 |
Rhizosphere microbes and host plant genotype influence the plant metabolome and reduce insect herbivory
CJ Hubbard, B Li, R McMinn, MT Brock, L Maignien, BE Ewers, ...
bioRxiv, 297556
|
2018 |
Network-guided discovery of extensive epistasis between transcription factors involved in aliphatic glucosinolate biosynthesis
B Li, M Tang, A Nelson, H Caligagan, X Zhou, C Clark-Wiest, R Ngo, ...
The Plant Cell 30 (1), 178-195
|
2018 |
An evolutionarily young defense metabolite influences the root growth of plants via the ancient TOR signaling pathway
FG Malinovsky, MLF Thomsen, SJ Nintemann, LM Jagd, B Bourgine, ...
Elife 6, e29353
|
2017 |
An integrated RNAseq-1H NMR metabolomics approach to understand soybean primary metabolism regulation in response to Rhizoctonia foliar blight disease
TR Copley, KA Aliferis, DJ Kliebenstein, SH Jabaji
BMC plant biology 17 (1), 1-18
|
2017 |
Initiation of ER body formation and indole glucosinolate metabolism by the plastidial retrograde signaling metabolite, MEcPP
JZ Wang, B Li, Y Xiao, Y Ni, H Ke, P Yang, A de Souza, M Bjornson, X He, ...
Molecular plant 10 (11), 1400-1416
|
2017 |
Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks within the Arabidopsis/Botrytis Pathosystem
W Zhang, JA Corwin, D Copeland, J Feusier, R Eshbaugh, F Chen, ...
The Plant Cell 29 (11), 2727-2752
|
2017 |
Epistasis × environment interactions among Arabidopsis thaliana glucosinolate genes impact complex traits and fitness in the field
RE Kerwin, J Feusier, A Muok, C Lin, B Larson, D Copeland, JA Corwin, ...
new phytologist 215 (3), 1249-1263
|
2017 |
Using RNA-Seq for Genomic Scaffold Placement, Correcting Assemblies, and Genetic Map Creation in a Common Brassica rapa Mapping Population
RJC Markelz, MF Covington, MT Brock, UK Devisetty, DJ Kliebenstein, ...
G3: Genes, Genomes, Genetics 7 (7), 2259-2270
|
2017 |
A novel Filamentous Flower mutant suppresses brevipedicellus developmental defects and modulates glucosinolate and auxin levels
SJ Douglas, B Li, DJ Kliebenstein, E Nambara, CD Riggs
Plos One 12 (5), e0177045
|
2017 |
A global coexpression network approach for connecting genes to specialized metabolic pathways in plants
JH Wisecaver, AT Borowsky, V Tzin, G Jander, DJ Kliebenstein, A Rokas
The Plant Cell 29 (5), 944-959
|
2017 |
Quantitative resistance: more than just perception of a pathogen
JA Corwin, DJ Kliebenstein
The Plant Cell 29 (4), 655-665
|
2017 |
Observability of plant metabolic networks Is reflected in the correlation of metabolic profiles
K Schwahn, A Küken, DJ Kliebenstein, AR Fernie, Z Nikoloski
Plant physiology 172 (2), 1324-1333
|
2016 |
An integrative genetic study of rice metabolism, growth and stochastic variation reveals potential C/N partitioning loci
B Li, Y Zhang, SA Mohammadi, D Huai, Y Zhou, DJ Kliebenstein
Scientific Reports 6 (1), 1-13
|
2016 |
Genome wide association mapping in Arabidopsis thaliana identifies novel genes involved in linking allyl glucosinolate to altered biomass and defense
M Francisco Candeira, B Joseph, H Caligagan, B Li, JA Corwin, C Lin, ...
Frontiers Media
|
2016 |
Genome Wide Association Mapping in Arabidopsis thaliana Identifies Novel Genes Involved in Linking Allyl Glucosinolate to Altered Biomass and Defense
M Francisco, B Joseph, H Caligagan, B Li, JA Corwin, C Lin, RE Kerwin, ...
Frontiers in plant science 7, 1010
|
2016 |
False idolatry of the mythical growth versus immunity tradeoff in molecular systems plant pathology
DJ Kliebenstein
Physiological and Molecular Plant Pathology 95, 55-59
|
2016 |
The defense metabolite, allyl glucosinolate, modulates Arabidopsis thaliana biomass dependent upon the endogenous glucosinolate pathway
M Francisco Candeira, B Joseph, H Caligagan, B Li, JA Corwin, C Lin, ...
Frontiers Media
|
2016 |
The Defense Metabolite, Allyl Glucosinolate, Modulates Arabidopsis thaliana Biomass Dependent upon the Endogenous Glucosinolate Pathway
M Francisco, B Joseph, H Caligagan, B Li, JA Corwin, C Lin, R Kerwin, ...
Frontiers in Plant Science 7, 774
|
2016 |
Expansive Phenotypic Landscape of Botrytis cinerea Shows Differential Contribution of Genetic Diversity and Plasticity
JA Corwin, A Subedy, R Eshbaugh, DJ Kliebenstein
Molecular Plant-Microbe Interactions 29 (4), 287-298
|
2016 |
Molecular mechanisms governing differential robustness of development and environmental responses in plants
J Lachowiec, C Queitsch, DJ Kliebenstein
Annals of botany 117 (5), 795-809
|
2016 |
Isolate Dependency of Brassica rapa Resistance QTLs to Botrytis cinerea
W Zhang, ST Kwon, F Chen, DJ Kliebenstein
Frontiers in plant science 7, 161
|
2016 |
The Quantitative Basis of the Arabidopsis Innate Immune System to Endemic Pathogens Depends on Pathogen Genetics
JA Corwin, D Copeland, J Feusier, A Subedy, R Eshbaugh, C Palmer, ...
PLoS genetics 12 (2), e1005789
|
2016 |
Pectin Biosynthesis Is Critical for Cell Wall Integrity and Immunity in Arabidopsis thaliana
G Bethke, A Thao, G Xiong, B Li, NE Soltis, N Hatsugai, RA Hillmer, ...
The Plant Cell 28 (2), 537-556
|
2016 |
Nonlinear selection and a blend of convergent, divergent and parallel evolution shapes natural variation in glucosinolates
DJ Kliebenstein, NI Cacho
Advances in Botanical Research 80, 31-55
|
2016 |
Metabolism: Evolution retraces its steps to advance
DJ Kliebenstein
Elife 4, e12386
|
2015 |
Keeping the rhythm: light/dark cycles during postharvest storage preserve the tissue integrity and nutritional content of leafy plants
JD Liu, D Goodspeed, Z Sheng, B Li, Y Yang, DJ Kliebenstein, J Braam
BMC plant biology 15 (1), 1-9
|
2015 |
Natural variation of plant metabolism: genetic mechanisms, interpretive caveats, and evolutionary and mechanistic insights
NE Soltis, DJ Kliebenstein
Plant Physiology 169 (3), 1456-1468
|
2015 |
Macroevolutionary patterns of glucosinolate defense and tests of defense‐escalation and resource availability hypotheses
NI Cacho, DJ Kliebenstein, SY Strauss
New Phytologist 208 (3), 915-927
|
2015 |
Overexpression of three glucosinolate biosynthesis genes in Brassica napus identifies enhanced resistance to Sclerotinia sclerotiorum and Botrytis cinerea
Y Zhang, D Huai, Q Yang, Y Cheng, M Ma, DJ Kliebenstein, Y Zhou
PLoS One 10 (10), e0140491
|
2015 |
The Plant Cell Introduces Breakthrough Reports: A New Forum for Cutting-Edge Plant Research
S Merchant, SY Bednarek, JA Birchler, G Coupland, NA Eckardt, ...
The Plant Cell 27 (10), 2667-2668
|
2015 |
Whole genome resequencing of Botrytis cinerea isolates identifies high levels of standing diversity
S Atwell, JA Corwin, NE Soltis, A Subedy, KJ Denby, DJ Kliebenstein
Frontiers in microbiology 6, 996
|
2015 |
Investigation of the multifunctional gene AOP3 expands the regulatory network fine-tuning glucosinolate production in Arabidopsis
LM Jensen, DJ Kliebenstein, M Burow
Frontiers in plant science 6, 762
|
2015 |
Natural variation in cross-talk between glucosinolates and onset of flowering in Arabidopsis
LM Jensen, HSK Jepsen, BA Halkier, DJ Kliebenstein, M Burow
Frontiers in plant science 6, 697
|
2015 |
Transcriptional networks governing plant metabolism
A Gaudinier, M Tang, DJ Kliebenstein
Current Plant Biology 3, 56-64
|
2015 |
The glucosinolate biosynthetic gene AOP2 mediates feed-back regulation of jasmonic acid signaling in Arabidopsis
M Burow, S Atwell, M Francisco, RE Kerwin, BA Halkier, DJ Kliebenstein
Molecular plant 8 (8), 1201-1212
|
2015 |
Quantitative Variation in Responses to Root Spatial Constraint within Arabidopsis thaliana
B Joseph, L Lau, DJ Kliebenstein
The Plant Cell 27 (8), 2227-2243
|
2015 |
Reassess the t Test: Interact with All Your Data via ANOVA
SM Brady, M Burow, W Busch, Ö Carlborg, KJ Denby, J Glazebrook, ...
The Plant Cell 27 (8), 2088-2094
|
2015 |
Acetylation of cell wall is required for structural integrity of the leaf surface and exerts a global impact on plant stress responses
M Nafisi, M Stranne, L Fimognari, S Atwell, HJ Martens, PR Pedas, ...
Frontiers in plant science 6, 550
|
2015 |
The conserved transcription factors, MYB115 and MYB118, control expression of the newly evolved benzoyloxy glucosinolate pathway in Arabidopsis thaliana
Y Zhang, B Li, D Huai, Y Zhou, DJ Kliebenstein
Frontiers in Plant Science 6, 343
|
2015 |
In planta variation of volatile biosynthesis: an alternative biosynthetic route to the formation of the pathogen-induced volatile homoterpene DMNT via triterpene degradation in …
R Sohrabi, JH Huh, S Badieyan, LH Rakotondraibe, DJ Kliebenstein, ...
The Plant Cell 27 (3), 874-890
|
2015 |
Genetic variation in the nuclear and organellar genomes modulates stochastic variation in the metabolome, growth, and defense
B Joseph, JA Corwin, DJ Kliebenstein
PLoS genetics 11 (1), e1004779
|
2015 |
Plant Physiology Preview. Published on August 13, 2015, as DOI: 10.1104/pp. 15.01108
NE Soltis, DJ Kliebenstein
|
2015 |
FOCUS ON METABOLISM
IMSMI Desalegn, W Etalo, RCH De Vos, MHAJ Joosten, RD Hall, ...
|
2015 |
Natural genetic variation in Arabidopsis thaliana defense metabolism genes modulates field fitness
R Kerwin, J Feusier, J Corwin, M Rubin, C Lin, A Muok, B Larson, B Li, ...
Elife 4
|
2015 |
An Arabidopsis gene regulatory network for secondary cell wall synthesis
M Taylor-Teeples, L Lin, M De Lucas, G Turco, TW Toal, A Gaudinier, ...
Nature 517 (7536), 571-575
|
2015 |
Promoter-based integration in plant defense regulation
B Li, A Gaudinier, M Tang, M Taylor-Teeples, NT Nham, C Ghaffari, ...
Plant physiology 166 (4), 1803-1820
|
2014 |
Meta-analysis of metabolome QTLs in Arabidopsis: trying to estimate the network size controlling genetic variation of the metabolome
B Joseph, S Atwell, JA Corwin, B Li, DJ Kliebenstein
Frontiers in plant science 5, 461
|
2014 |
Response of turnip to Botrytis cinerea infection and their relationship with glucosinolate profiles
ST Kwon, DJ Kliebenstein
Korean Journal of Plant Resources 27 (4), 371-379
|
2014 |
The AT-hook motif-encoding gene METABOLIC NETWORK MODULATOR 1 underlies natural variation in Arabidopsis primary metabolism
B Li, DJ Kliebenstein
Frontiers in plant science 5, 415
|
2014 |
Synthetic biology of metabolism: using natural variation to reverse engineer systems
DJ Kliebenstein
Current opinion in plant biology 19, 20-26
|
2014 |
Interview with Daniel Kliebenstein.
DJ Kliebenstein
Trends in plant science 19 (4), 204-205
|
2014 |
Orchestration of plant defense systems: genes to populations
DJ Kliebenstein
Trends in plant science 19 (4), 250-255
|
2014 |
Promoter-Based Integration in Plant Defense Regulation1 [W][OPEN]
B Li, A Gaudinier, M Tang, M Taylor-Teeples, NT Nham, C Ghaffari, ...
|
2014 |
Natural genetic variation in growth and metabolite regulatory roles of Allyl glucosinolate in Arabidopsis thaliana
M Francisco Candeira, DJ Kliebenstein
Wageningen Universiteit
|
2014 |
Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome
B Joseph, JA Corwin, B Li, S Atwell, DJ Kliebenstein
Elife 2, e00776
|
2013 |
Fatty acids and early detection of pathogens
JW Walley, DJ Kliebenstein, RM Bostock, K Dehesh
Current opinion in plant biology 16 (4), 520-526
|
2013 |
Postharvest circadian entrainment enhances crop pest resistance and phytochemical cycling
D Goodspeed, JD Liu, EW Chehab, Z Sheng, M Francisco, ...
Current Biology 23 (13), 1235-1241
|
2013 |
Hierarchical Nuclear and Cytoplasmic Genetic Architectures for Plant Growth and Defense within Arabidopsis
B Joseph, JA Corwin, T Züst, B Li, M Iravani, G Schaepman-Strub, ...
The Plant Cell 25 (6), 1929-1945
|
2013 |
Identification of novel loci regulating interspecific variation in root morphology and cellular development in tomato
M Ron, MW Dorrity, M de Lucas, T Toal, RI Hernandez, SA Little, ...
Plant Physiology 162 (2), 755-768
|
2013 |
Conducting Genome‐Wide Association Mapping of Metabolites
S Atwell, DJ Kliebenstein
The Handbook of Plant Metabolomics, 255-271
|
2013 |
New synthesis—regulatory evolution, the veiled world of chemical diversification
DJ Kliebenstein
Journal of chemical ecology 39 (3), 349-349
|
2013 |
Making new molecules—evolution of structures for novel metabolites in plants
DJ Kliebenstein
Current opinion in plant biology 16 (1), 112-117
|
2013 |
Natural enemies drive geographic variation in plant defenses
T Züst, C Heichinger, U Grossniklaus, R Harrington, DJ Kliebenstein, ...
Science 338 (6103), 116-119
|
2012 |
Exploring the shallow end; estimating information content in transcriptomics studies
DJ Kliebenstein
Frontiers in plant science 3, 213
|
2012 |
Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis
O Windram, P Madhou, S McHattie, C Hill, R Hickman, E Cooke, ...
The Plant Cell 24 (9), 3530-3557
|
2012 |
Making new molecules–evolution of pathways for novel metabolites in plants
DJ Kliebenstein, A Osbourn
Current opinion in plant biology 15 (4), 415-423
|
2012 |
Retrograde signaling by the plastidial metabolite MEcPP regulates expression of nuclear stress-response genes
Y Xiao, T Savchenko, EEK Baidoo, WE Chehab, DM Hayden, V Tolstikov, ...
Cell 149 (7), 1525-1535
|
2012 |
Plant defense compounds: systems approaches to metabolic analysis
DJ Kliebenstein
Annual review of phytopathology 50, 155-73
|
2012 |
What can causal networks tell us about metabolic pathways?
RH Blair, DJ Kliebenstein, GA Churchill
PLoS computational biology 8 (4), e1002458
|
2012 |
Model misinterpretation within biology: phenotypes, statistics, networks, and inference
DJ Kliebenstein
Frontiers in plant science 3, 13
|
2012 |
Making new molecules-evolution of structures for novel metabolites in plants
DJ Kliebenstein
Current Opinion in Plant Biology 16, 1-6
|
2012 |
An ecological genomic approach challenging the paradigm of differential plant responses to specialist versus generalist insect herbivores
MG Bidart-Bouzat, D Kliebenstein
Oecologia 167 (3), 677-689
|
2011 |
Genomic analysis of QTLs and genes altering natural variation in stochastic noise
JM Jimenez-Gomez, JA Corwin, B Joseph, JN Maloof, DJ Kliebenstein
PLoS genetics 7 (9), e1002295
|
2011 |
Using knockout mutants to reveal the growth costs of defensive traits
T Züst, B Joseph, KK Shimizu, DJ Kliebenstein, LA Turnbull
Proceedings of the Royal Society B: Biological Sciences 278 (1718), 2598-2603
|
2011 |
Biosynthesis and Defensive Function of N Δ-Acetylornithine, a Jasmonate-Induced Arabidopsis Metabolite
AM Adio, CL Casteel, M De Vos, JH Kim, V Joshi, B Li, C Juéry, J Daron, ...
The Plant Cell 23 (9), 3303-3318
|
2011 |
Cofactome analyses reveal enhanced flux of carbon into oil for potential biofuel production
DM Hayden, H Rolletschek, L Borisjuk, J Corwin, DJ Kliebenstein, ...
The Plant Journal 67 (6), 1018-1028
|
2011 |
The quantitative genetics of phenotypic error or uniformity
DJ Kliebenstein
Frontiers in Genetics 2, 59
|
2011 |
Combining Genome-Wide Association Mapping and Transcriptional Networks to Identify Novel Genes Controlling Glucosinolates in Arabidopsis thaliana
EKF Chan, HC Rowe, JA Corwin, B Joseph, DJ Kliebenstein
PLoS biology 9 (8), e1001125
|
2011 |
Chemically mediated tritrophic interactions: opposing effects of glucosinolates on a specialist herbivore and its predators
R Chaplin‐Kramer, DJ Kliebenstein, A Chiem, E Morrill, NJ Mills, ...
Journal of Applied Ecology 48 (4), 880-887
|
2011 |
Genetic and functional modularity: how does an organism solve a nearly infinite genetic/environmental problem space?
DJ Kliebenstein
Heredity 106 (6), 909
|
2011 |
Intronic T-DNA Insertion Renders Arabidopsis opr3 a Conditional Jasmonic Acid-Producing Mutant
EW Chehab, S Kim, T Savchenko, D Kliebenstein, K Dehesh, J Braam
Plant Physiology 156 (2), 770-778
|
2011 |
Arctic mustard flower color polymorphism controlled by petal-specific downregulation at the threshold of the anthocyanin biosynthetic pathway
CA Dick, J Buenrostro, T Butler, ML Carlson, DJ Kliebenstein, JB Whittall
PloS one 6 (4), e18230
|
2011 |
Network Quantitative Trait Loci Mapping of Circadian Clock Outputs Identifies Metabolic Pathway-to-Clock Linkages in Arabidopsis
RE Kerwin, JM Jimenez-Gomez, D Fulop, SL Harmer, JN Maloof, ...
The Plant Cell 23 (2), 471-485
|
2011 |
Quantitative genomics of natural variation in plant metabolism: the illusion of simplicity
DJ Kliebenstein
第二届植物代谢国际会议论文集
|
2011 |
The complex genetic architecture of the metabolome
EKF Chan, HC Rowe, BG Hansen, DJ Kliebenstein
PLoS genetics 6 (11), e1001198
|
2010 |
A new method for measuring relative growth rate can uncover the costs of defensive compounds in Arabidopsis thaliana
C Paul‐Victor, T Züst, M Rees, DJ Kliebenstein, LA Turnbull
New Phytologist 187 (4), 1102-1111
|
2010 |
Understanding the Evolution of Defense Metabolites in Arabidopsis thaliana Using Genome-wide Association Mapping
EKF Chan, HC Rowe, DJ Kliebenstein
Genetics 185 (3), 991-1007
|
2010 |
Using network biology to identify quantitative genetic variation altering signaling in both plant host and generalist pathogens
DJ Kliebenstein
PHYTOPATHOLOGY 100 (6), S165-S165
|
2010 |
Regulatory networks of glucosinolates shape Arabidopsis thaliana fitness
M Burow, BA Halkier, DJ Kliebenstein
Current opinion in plant biology 13 (3), 347-352
|
2010 |
A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis
IE Sønderby, M Burow, HC Rowe, DJ Kliebenstein, BA Halkier
Plant physiology 153 (1), 348-363
|
2010 |
Deficiencies in jasmonate-mediated plant defense reveal quantitative variation in Botrytis cinerea pathogenesis
HC Rowe, JW Walley, J Corwin, EKF Chan, K Dehesh, DJ Kliebenstein
PLoS pathogens 6 (4), e1000861
|
2010 |
All mold is not alike: the importance of intraspecific diversity in necrotrophic plant pathogens
HC Rowe, DJ Kliebenstein
PLoS pathogens 6 (3), e1000759
|
2010 |
Systems biology uncovers the foundation of natural genetic diversity
DJ Kliebenstein
Plant Physiology 152 (2), 480-486
|
2010 |
Flavin monooxygenases and transcription factors involved in glucosinolate biosynthesis
DJ Kliebenstein, B Halkier, BG Hansen, IE Soenderby
US Patent App. 12/438,332
|
2010 |
MODIFIED VACUOLE PHENOTYPE1 is an Arabidopsis myrosinase-associated protein involved in endomembrane protein trafficking
AE Agee, M Surpin, EJ Sohn, T Girke, A Rosado, BW Kram, C Carter, ...
Plant physiology 152 (1), 120-132
|
2010 |
Advancing genetic theory and application by metabolic quantitative trait loci analysis
DJ Kliebenstein
The plant cell 21 (6), 1637-1646
|
2009 |
Anti-rust antitrust
DJ Kliebenstein, HC Rowe
Science 323 (5919), 1301-1302
|
2009 |
Use of secondary metabolite variation in crop improvement
DJ Kliebenstein
Plant-derived natural products, 83-95
|
2009 |
Quantification of variation in expression networks
DJ Kliebenstein
Plant Systems Biology, 227-245
|
2009 |
Competition, herbivory and genetics interact to determine the accumulation and fitness consequences of a defence metabolite
RA Lankau, DJ Kliebenstein
Journal of Ecology, 78-88
|
2009 |
The genetic basis of constitutive and herbivore-induced ESP-independent nitrile formation in Arabidopsis
M Burow, A Losansky, R Muller, A Plock, DJ Kliebenstein, U Wittstock
Plant physiology 149 (1), 561-574
|
2009 |
A quantitative genetics and ecological model system: understanding the aliphatic glucosinolate biosynthetic network via QTLs
DJ Kliebenstein
Phytochemistry reviews 8 (1), 243-254
|
2009 |
The chromatin remodeler SPLAYED regulates specific stress signaling pathways
JW Walley, HC Rowe, Y Xiao, EW Chehab, DJ Kliebenstein, D Wagner, ...
PLoS pathogens 4 (12), e1000237
|
2008 |
A novel 2-oxoacid-dependent dioxygenase involved in the formation of the goiterogenic 2-hydroxybut-3-enyl glucosinolate and generalist insect resistance in Arabidopsis
BG Hansen, RE Kerwin, JA Ober, VM Lambrix, T Mitchell-Olds, ...
Plant physiology 148 (4), 2096-2108
|
2008 |
Complex Genetics Control Natural Variation in Arabidopsis thaliana Resistance to Botrytis cinerea
HC Rowe, DJ Kliebenstein
Genetics 180 (4), 2237-2250
|
2008 |
Determination of the absolute configuration of the glucosinolate methyl sulfoxide group reveals a stereospecific biosynthesis of the side chain
F Vergara, M Wenzler, BG Hansen, DJ Kliebenstein, BA Halkier, ...
Phytochemistry 69 (15), 2737-2742
|
2008 |
Subclade of flavin-monooxygenases involved in aliphatic glucosinolate biosynthesis
J Li, BG Hansen, JA Ober, DJ Kliebenstein, BA Halkier
Plant Physiology 148 (3), 1721-1733
|
2008 |
Genetic networks controlling structural outcome of glucosinolate activation across development
AM Wentzell, I Boeye, Z Zhang, DJ Kliebenstein
PLoS genetics 4 (10), e1000234
|
2008 |
Differential levels of insect herbivory in the field associated with genotypic variation in glucosinolates in Arabidopsis thaliana
MG Bidart-Bouzat, DJ Kliebenstein
Journal of chemical ecology 34 (8), 1026-1037
|
2008 |
Ecological costs of biotrophic versus necrotrophic pathogen resistance, the hypersensitive response and signal transduction
DJ Kliebenstein, HC Rowe
Plant Science 174 (6), 551-556
|
2008 |
Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation
AM Wentzell, DJ Kliebenstein
Plant physiology 147 (1), 415-428
|
2008 |
Biochemical Networks and Epistasis Shape the Arabidopsis thaliana Metabolome
HC Rowe, BG Hansen, BA Halkier, DJ Kliebenstein
The Plant Cell 20 (5), 1199-1216
|
2008 |
A role for gene duplication and natural variation of gene expression in the evolution of metabolism
DJ Kliebenstein
PloS one 3 (3), e1838
|
2008 |
ESP and ESM1 mediate indol-3-acetonitrile production from indol-3-ylmethyl glucosinolate in Arabidopsis
M Burow, ZY Zhang, JA Ober, VM Lambrix, U Wittstock, J Gershenzon, ...
Phytochemistry 69 (3), 663-671
|
2008 |
Identifying the molecular basis of QTLs: eQTLs add a new dimension
BG Hansen, BA Halkier, DJ Kliebenstein
Trends in plant science 13 (2), 72-77
|
2008 |
Research Area: Biochemical Processes and Macromolecular Structures
DJ Kliebenstein
|
2008 |
The Chromatin Remodeler SPLAYED Regulates Specific Stress Signaling
JW Walley, HC Rowe, Y Xiao, EW Chehab, DJ Kliebenstein
|
2008 |
A systems biology approach identifies a R2R3 MYB gene subfamily with distinct and overlapping functions in regulation of aliphatic glucosinolates
IE Sønderby, BG Hansen, N Bjarnholt, C Ticconi, BA Halkier, ...
PLoS One 2 (12), e1322
|
2007 |
Elevated Genetic Variation Within Virulence-Associated Botrytis cinerea Polygalacturonase Loci
HC Rowe, DJ Kliebenstein
Molecular Plant-Microbe Interactions 20 (9), 1126-1137
|
2007 |
Characterization of seed‐specific benzoyloxyglucosinolate mutations in Arabidopsis thaliana
DJ Kliebenstein, JC D’Auria, AS Behere, JH Kim, KL Gunderson, ...
The Plant Journal 51 (6), 1062-1076
|
2007 |
Linking Metabolic QTLs with Network and cis-eQTLs Controlling Biosynthetic Pathways
AM Wentzell, HC Rowe, BG Hansen, C Ticconi, BA Halkier, ...
Plos genetics 3 (9), e162
|
2007 |
Natural Variation among Arabidopsis thaliana Accessions for Transcriptome Response to Exogenous Salicylic Acid
H Van Leeuwen, DJ Kliebenstein, MAL West, K Kim, R Van Poecke, ...
The Plant Cell 19 (7), 2099-2110
|
2007 |
Identification of a flavin‐monooxygenase as the S‐oxygenating enzyme in aliphatic glucosinolate biosynthesis in Arabidopsis
BG Hansen, DJ Kliebenstein, BA Halkier
The Plant Journal 50 (5), 902-910
|
2007 |
Global eQTL mapping reveals the complex genetic architecture of transcript-level variation in Arabidopsis
MAL West, K Kim, DJ Kliebenstein, H Van Leeuwen, RW Michelmore, ...
Genetics 175 (3), 1441-1450
|
2007 |
Metabolomics and Plant Quantitative Trait Locus Analysis–The optimum genetical genomics platform?
DJ Kliebenstein
Concepts in plant metabolomics, 29-44
|
2007 |
Convergence, constraint and the role of gene expression during adaptive radiation: floral anthocyanins in Aquilegia
JB Whittall, C Voelckel, DJ Kliebenstein, SA Hodges
Molecular Ecology 15 (14), 4645-4657
|
2006 |
Identification of QTLs controlling gene expression networks defined a priori
DJ Kliebenstein, MAL West, H van Leeuwen, O Loudet, RW Doerge, ...
BMC bioinformatics 7 (1), 1-17
|
2006 |
Glucosinolate survey of cultivated and feral mashua (Tropaeolum tuberosum Ruíz & Pavón) in the Cuzco Region of Peru
OR Ortega, DJ Kliebenstein, C Arbizu, R Ortega, CF Quiros
Economic botany 60 (3), 254-264
|
2006 |
The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory (vol 13, pg 2793, 2001)
V Lambrix, M Reichelt, T Mitchell-Olds, DJ Kliebenstein, J Gershenzon
Plant Cell 18 (6), 1537-1537
|
2006 |
High-density haplotyping with microarray-based expression and single feature polymorphism markers in Arabidopsis
MAL West, H Van Leeuwen, A Kozik, DJ Kliebenstein, RW Doerge, ...
Genome Research 16 (6), 787-795
|
2006 |
The Gene Controlling the Quantitative Trait Locus EPITHIOSPECIFIER MODIFIER1 Alters Glucosinolate Hydrolysis and Insect Resistance in Arabidopsis
Z Zhang, JA Ober, DJ Kliebenstein
The Plant Cell 18 (6), 1524-1536
|
2006 |
Genomic Survey of Gene Expression Diversity in Arabidopsis thaliana
DJ Kliebenstein, MAL West, H Van Leeuwen, K Kim, RW Doerge, ...
Genetics 172 (2), 1179-1189
|
2006 |
A UV-B-specific signaling component orchestrates plant UV protection
BA Brown, C Cloix, GH Jiang, E Kaiserli, P Herzyk, DJ Kliebenstein, ...
Proceedings of the National Academy of Sciences 102 (50), 18225-18230
|
2005 |
Secondary metabolites influence Arabidopsis/Botrytis interactions: variation in host production and pathogen sensitivity
DJ Kliebenstein, HC Rowe, KJ Denby
The Plant Journal 44 (1), 25-36
|
2005 |
Geographic and evolutionary diversification of glucosinolates among near relatives of Arabidopsis thaliana (Brassicaceae)
AJ Windsor, M Reichelt, A Figuth, A Svatoš, J Kroymann, DJ Kliebenstein, ...
Phytochemistry 66 (11), 1321-1333
|
2005 |
A constitutive PR‐1::luciferase expression screen identifies Arabidopsis mutants with differential disease resistance to both biotrophic and necrotrophic pathogens
SL Murray, N Adams, DJ Kliebenstein, GJ Loake, KJ Denby
Molecular plant pathology 6 (1), 31-41
|
2005 |
Substrate-dependent isothiocyanate toxicity
LE Yakabe, JD MacDonald, DJ Kliebenstein
Phytopathology 94 (6)
|
2004 |
Secondary metabolites and plant/environment interactions: a view through Arabidopsis thaliana tinged glasses
DJ Kliebenstein
Plant, Cell & Environment 27 (6), 675-684
|
2004 |
Identification of Botrytis cinerea susceptibility loci in Arabidopsis thaliana
KJ Denby, P Kumar, DJ Kliebenstein
The Plant Journal 38 (3), 473-486
|
2004 |
" Present address: Department of Vegetable Crops, University of California
U Wittstock, DJ Kliebenstein, V Lambrix, M Reichelt
Integrative Phytochemistry: from Ethnobotany to Molecular Ecology: Recent …
|
2003 |
Chapter five Glucosinolate hydrolysis and its impact on generalist and specialist insect herbivores
U Wittstock, DJ Kliebenstein, V Lambrix, M Reichelt, J Gershenzon
Recent advances in phytochemistry 37, 101-125
|
2003 |
Arabidopsis UVR8 Regulates Ultraviolet-B Signal Transduction and Tolerance and Contains Sequence Similarity to Human Regulator of Chromatin Condensation 1
DJ Kliebenstein, JE Lim, LG Landry, RL Last
Plant physiology 130 (1), 234-243
|
2002 |
Disarming the mustard oil bomb
A Ratzka, H Vogel, DJ Kliebenstein, T Mitchell-Olds, J Kroymann
Proceedings of the National Academy of Sciences 99 (17), 11223-11228
|
2002 |
Genetic Architecture of Plastic Methyl Jasmonate Responses in Arabidopsis thaliana
DJ Kliebenstein, A Figuth, T Mitchell-Olds
Genetics 161 (4), 1685-1696
|
2002 |
Comparative Analysis of Quantitative Trait Loci Controlling Glucosinolates, Myrosinase and Insect Resistance in Arabidopsis thaliana
D Kliebenstein, D Pedersen, B Barker, T Mitchell-Olds
Genetics 161 (1), 325-332
|
2002 |
Benzoic acid glucosinolate esters and other glucosinolates from Arabidopsis thaliana
M Reichelt, PD Brown, B Schneider, NJ Oldham, E Stauber, J Tokuhisa, ...
Phytochemistry 59 (6), 663-671
|
2002 |
Comparative analysis of insect resistance QTL and QTL controlling the myrosinase/glucosinolate system in Arabidopsis thaliana
DJ Kliebenstein
Genetics 161, 325-332
|
2002 |
The Arabidopsis Epithiospecifier Protein Promotes the Hydrolysis of Glucosinolates to Nitriles and Influences Trichoplusia ni Herbivory
V Lambrix, M Reichelt, T Mitchell-Olds, DJ Kliebenstein, J Gershenzon
The Plant Cell 13 (12), 2793-2807
|
2001 |
Comparative Quantitative Trait Loci Mapping of Aliphatic, Indolic and Benzylic Glucosinolate Production in Arabidopsis thaliana Leaves and Seeds
DJ Kliebenstein, J Gershenzon, T Mitchell-Olds
Genetics 159 (1), 359-370
|
2001 |
Genetic control of natural variation in Arabidopsis glucosinolate accumulation
DJ Kliebenstein, J Kroymann, P Brown, A Figuth, D Pedersen, ...
Plant physiology 126 (2), 811-825
|
2001 |
Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate–dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis
DJ Kliebenstein, VM Lambrix, M Reichelt, J Gershenzon, T Mitchell-Olds
The Plant Cell 13 (3), 681-693
|
2001 |
LSD1 regulates salicylic acid induction of copper zinc superoxide dismutase in Arabidopsis thaliana
DJ Kliebenstein, RA Dietrich, AC Martin, RL Last, JL Dangl
Molecular plant-microbe interactions 12 (11), 1022-1026
|
1999 |
Arabidopsis superoxide dismutase
DJ Kliebenstein
Cornell University
|
1999 |
Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization
DJ Kliebenstein, RA Monde, RL Last
Plant physiology 118 (2), 637-650
|
1998 |
Arabidopsis mutants altered in antioxidant enzyme accumulation.
DJ Kliebenstein, PL Conklin, LG Landry, EH Williams, RL Last
PLANT PHYSIOLOGY 114 (3), 193-193
|
1997 |
Destabilization ofrbcS sense transcripts by antisense RNA
CZ Jiang, D Kliebenstein, N Ke, S Rodermel
Plant molecular biology 25 (3), 569-576
|
1994 |
Antisense RNA inhibition of Rubisco activase expression
CZ Jiang, WP Quick, R Alred, D Kliebenstein, SR Rodermel
The Plant Journal 5 (6), 787-798
|
1994 |
MECHANISM OF ANTISENSE INHIBITION IN TOBACCO ANTISENSE MUTANTS
DJ KLIEBENSTEIN, CZ JIANG, N KE, SR RODERMEL
PLANT PHYSIOLOGY 102 (1), 18-18
|
1993 |
ANTISENSE MESSENGER-RNA INHIBITION OF RUBISCO ACTIVASE EXPRESSION
CZ JIANG, DJ KLIEBENSTEIN, SR RODERMEL
PLANT PHYSIOLOGY 102 (1), 37-37
|
1993 |